In Silico Clermont Phylotyper

Easily find the Clermont 2013 phylotypes of your E. coli strains. Simply upload your contigs as a FASTA file, and get results in seconds.




Try refreshing this page if you run into any issues. You can see the source code on GitHub .

Does some result look strange? Please raise an issue on GitHub, attaching your genome of interest..

Want to run a big batch of genomes? Install our commandline tool via pip!