In Silico Clermont Phylotyper

Easily find the Clermont 2013 phylotypes of your E. coli strains. Simply upload your contigs as a FASTA file, and get results in seconds.

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Troubleshooting

    
Try refreshing this page if you run into any issues. You can see the source code on GitHub .

    
Does some result look strange? Please raise an issue on GitHub, attaching your genome of interest.. 

    
Want to run a big batch of genomes?  Install our commandline tool via pip!